Merge pull request #157 from maropu/ISSUE-155

Implement ByteBuffer-based APIs for BitShuffle
This commit is contained in:
Taro L. Saito 2017-01-25 22:43:39 -08:00 committed by GitHub
commit 40b37ab343
8 changed files with 486 additions and 49 deletions

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@ -97,10 +97,10 @@ BitShuffle is an algorithm that reorders data bits (shuffle) for efficient compr
import org.xerial.snappy.BitShuffle;
int[] data = new int[] {1, 3, 34, 43, 34};
byte[] shuffledByteArray = BitShuffle.bitShuffle(data);
byte[] shuffledByteArray = BitShuffle.shuffle(data);
byte[] compressed = Snappy.compress(shuffledByteArray);
byte[] uncompressed = Snappy.uncompress(compressed);
int[] result = BitShuffle.bitUnShuffleIntArray(uncompress);
int[] result = BitShuffle.unshuffleIntArray(uncompress);
System.out.println(result);
```

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@ -25,6 +25,7 @@
package org.xerial.snappy;
import java.io.IOException;
import java.nio.ByteBuffer;
public class BitShuffle
{
@ -42,6 +43,46 @@ public class BitShuffle
*/
private static BitShuffleNative impl;
/**
* Apply a bit-shuffling filter into the content in the given input buffer. After bit-shuffling,
* you can retrieve the shuffled data from the output buffer [pos() ...limit())
* (shuffled data size = limit() - pos() = remaining()).
*
* @param input buffer[pos() ... limit()) containing the input data
* @param type element type of the input data
* @param shuffled output of the shuffled data. Uses range [pos()..].
* @return byte size of the shuffled data.
* @throws SnappyError when the input is not a direct buffer
* @throws IllegalArgumentException when the input length is not a multiple of the given type size
*/
public static int shuffle(ByteBuffer input, BitShuffleType type, ByteBuffer shuffled) throws IOException {
if (!input.isDirect()) {
throw new SnappyError(SnappyErrorCode.NOT_A_DIRECT_BUFFER, "input is not a direct buffer");
}
if (!shuffled.isDirect()) {
throw new SnappyError(SnappyErrorCode.NOT_A_DIRECT_BUFFER, "destination is not a direct buffer");
}
// input: input[pos(), limit())
// output: shuffled
int uPos = input.position();
int uLen = input.remaining();
int typeSize = type.getTypeSize();
if (uLen % typeSize != 0) {
throw new IllegalArgumentException("input length must be a multiple of the given type size: " + typeSize);
}
if (shuffled.remaining() < uLen) {
throw new IllegalArgumentException("not enough space for output");
}
int numProcessed = impl.shuffleDirectBuffer(input, uPos, typeSize, uLen, shuffled, shuffled.position());
assert(numProcessed == uLen);
// pos limit
// [ ......BBBBBBB.........]
shuffled.limit(shuffled.position() + numProcessed);
return numProcessed;
}
/**
* Apply a bit-shuffling filter into the input short array.
*
@ -49,9 +90,9 @@ public class BitShuffle
* @return bit-shuffled byte array
* @throws IOException
*/
public static byte[] bitShuffle(short[] input) throws IOException {
public static byte[] shuffle(short[] input) throws IOException {
byte[] output = new byte[input.length * 2];
int numProcessed = impl.bitShuffle(input, 0, 2, input.length * 2, output, 0);
int numProcessed = impl.shuffle(input, 0, 2, input.length * 2, output, 0);
assert(numProcessed == input.length * 2);
return output;
}
@ -63,9 +104,9 @@ public class BitShuffle
* @return bit-shuffled byte array
* @throws IOException
*/
public static byte[] bitShuffle(int[] input) throws IOException {
public static byte[] shuffle(int[] input) throws IOException {
byte[] output = new byte[input.length * 4];
int numProcessed = impl.bitShuffle(input, 0, 4, input.length * 4, output, 0);
int numProcessed = impl.shuffle(input, 0, 4, input.length * 4, output, 0);
assert(numProcessed == input.length * 4);
return output;
}
@ -77,9 +118,9 @@ public class BitShuffle
* @return bit-shuffled byte array
* @throws IOException
*/
public static byte[] bitShuffle(long[] input) throws IOException {
public static byte[] shuffle(long[] input) throws IOException {
byte[] output = new byte[input.length * 8];
int numProcessed = impl.bitShuffle(input, 0, 8, input.length * 8, output, 0);
int numProcessed = impl.shuffle(input, 0, 8, input.length * 8, output, 0);
assert(numProcessed == input.length * 8);
return output;
}
@ -91,9 +132,9 @@ public class BitShuffle
* @return bit-shuffled byte array
* @throws IOException
*/
public static byte[] bitShuffle(float[] input) throws IOException {
public static byte[] shuffle(float[] input) throws IOException {
byte[] output = new byte[input.length * 4];
int numProcessed = impl.bitShuffle(input, 0, 4, input.length * 4, output, 0);
int numProcessed = impl.shuffle(input, 0, 4, input.length * 4, output, 0);
assert(numProcessed == input.length * 4);
return output;
}
@ -105,13 +146,53 @@ public class BitShuffle
* @return bit-shuffled byte array
* @throws IOException
*/
public static byte[] bitShuffle(double[] input) throws IOException {
public static byte[] shuffle(double[] input) throws IOException {
byte[] output = new byte[input.length * 8];
int numProcessed = impl.bitShuffle(input, 0, 8, input.length * 8, output, 0);
int numProcessed = impl.shuffle(input, 0, 8, input.length * 8, output, 0);
assert(numProcessed == input.length * 8);
return output;
}
/**
* Convert the input bit-shuffled byte array into an original array. The result is dumped
* to the specified output buffer.
*
* @param shuffled buffer[pos() ... limit()) containing the input shuffled data
* @param type element type of the input data
* @param output output of the the original data. It uses buffer[pos()..]
* @return byte size of the unshuffled data.
* @throws IOException when failed to unshuffle the given input
* @throws SnappyError when the input is not a direct buffer
* @throws IllegalArgumentException when the length of input shuffled data is not a multiple of the given type size
*/
public static int unshuffle(ByteBuffer shuffled, BitShuffleType type, ByteBuffer output) throws IOException {
if (!shuffled.isDirect()) {
throw new SnappyError(SnappyErrorCode.NOT_A_DIRECT_BUFFER, "input is not a direct buffer");
}
if (!output.isDirect()) {
throw new SnappyError(SnappyErrorCode.NOT_A_DIRECT_BUFFER, "destination is not a direct buffer");
}
// input: input[pos(), limit())
// output: shuffled
int uPos = shuffled.position();
int uLen = shuffled.remaining();
int typeSize = type.getTypeSize();
if (uLen % typeSize != 0) {
throw new IllegalArgumentException("length of input shuffled data must be a multiple of the given type size: " + typeSize);
}
if (output.remaining() < uLen) {
throw new IllegalArgumentException("not enough space for output");
}
int numProcessed = impl.unshuffleDirectBuffer(shuffled, uPos, typeSize, uLen, output, shuffled.position());
assert(numProcessed == uLen);
// pos limit
// [ ......BBBBBBB.........]
shuffled.limit(shuffled.position() + numProcessed);
return numProcessed;
}
/**
* Convert the input bit-shuffled byte array into an original short array.
*
@ -119,9 +200,9 @@ public class BitShuffle
* @return a short array
* @throws IOException
*/
public static short[] bitUnShuffleShortArray(byte[] input) throws IOException {
public static short[] unshuffleShortArray(byte[] input) throws IOException {
short[] output = new short[input.length / 2];
int numProcessed = impl.bitUnShuffle(input, 0, 2, input.length, output, 0);
int numProcessed = impl.unshuffle(input, 0, 2, input.length, output, 0);
assert(numProcessed == input.length);
return output;
}
@ -133,9 +214,9 @@ public class BitShuffle
* @return an int array
* @throws IOException
*/
public static int[] bitUnShuffleIntArray(byte[] input) throws IOException {
public static int[] unshuffleIntArray(byte[] input) throws IOException {
int[] output = new int[input.length / 4];
int numProcessed = impl.bitUnShuffle(input, 0, 4, input.length, output, 0);
int numProcessed = impl.unshuffle(input, 0, 4, input.length, output, 0);
assert(numProcessed == input.length);
return output;
}
@ -147,9 +228,9 @@ public class BitShuffle
* @return a long array
* @throws IOException
*/
public static long[] bitUnShuffleLongArray(byte[] input) throws IOException {
public static long[] unshuffleLongArray(byte[] input) throws IOException {
long[] output = new long[input.length / 8];
int numProcessed = impl.bitUnShuffle(input, 0, 8, input.length, output, 0);
int numProcessed = impl.unshuffle(input, 0, 8, input.length, output, 0);
assert(numProcessed == input.length);
return output;
}
@ -161,9 +242,9 @@ public class BitShuffle
* @return an float array
* @throws IOException
*/
public static float[] bitUnShuffleFloatArray(byte[] input) throws IOException {
public static float[] unshuffleFloatArray(byte[] input) throws IOException {
float[] output = new float[input.length / 4];
int numProcessed = impl.bitUnShuffle(input, 0, 4, input.length, output, 0);
int numProcessed = impl.unshuffle(input, 0, 4, input.length, output, 0);
assert(numProcessed == input.length);
return output;
}
@ -175,9 +256,9 @@ public class BitShuffle
* @return a double array
* @throws IOException
*/
public static double[] bitUnShuffleDoubleArray(byte[] input) throws IOException {
public static double[] unshuffleDoubleArray(byte[] input) throws IOException {
double[] output = new double[input.length / 8];
int numProcessed = impl.bitUnShuffle(input, 0, 8, input.length, output, 0);
int numProcessed = impl.unshuffle(input, 0, 8, input.length, output, 0);
assert(numProcessed == input.length);
return output;
}

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@ -28,11 +28,11 @@ inline void throw_exception(JNIEnv *env, jobject self, int errorCode)
}
/*
* Class: org_xerial_snappy_SnappyNative
* Method: bitShuffle
* Class: org_xerial_snappy_BitShuffleNative
* Method: shuffle
* Signature: (Ljava/lang/Object;IIILjava/lang/Object;I)I
*/
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_bitShuffle
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_shuffle
(JNIEnv * env, jobject self, jobject input, jint inputOffset, jint typeSize, jint length, jobject output, jint outputOffset)
{
char* in = (char*) env->GetPrimitiveArrayCritical((jarray) input, 0);
@ -59,11 +59,32 @@ JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_bitShuffle
}
/*
* Class: org_xerial_snappy_SnappyNative
* Method: bitUnShuffle
* Class: org_xerial_snappy_BitShuffleNative
* Method: shuffleDirectBuffer
* Signature: (Ljava/nio/ByteBuffer;IIILjava/nio/ByteBuffer;I)I
*/
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_shuffleDirectBuffer
(JNIEnv * env, jobject self, jobject input, jint inputOffset, jint typeSize, jint length, jobject output, jint outputOffset)
{
char* inputBuffer = (char*) env->GetDirectBufferAddress(input);
char* outputBuffer = (char*) env->GetDirectBufferAddress(output);
if(inputBuffer == 0 || outputBuffer == 0) {
throw_exception(env, self, 3);
return (jint) 0;
}
int64_t processedBytes = bshuf_bitshuffle(
inputBuffer + inputOffset, outputBuffer + outputOffset, (size_t) (length / typeSize), (size_t) typeSize, 0);
return (jint) processedBytes;
}
/*
* Class: org_xerial_snappy_BitShuffleNative
* Method: unshuffle
* Signature: (Ljava/lang/Object;IIILjava/lang/Object;I)I
*/
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_bitUnShuffle
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_unshuffle
(JNIEnv * env, jobject self, jobject input, jint inputOffset, jint typeSize, jint length, jobject output, jint outputOffset)
{
char* in = (char*) env->GetPrimitiveArrayCritical((jarray) input, 0);
@ -89,3 +110,24 @@ JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_bitUnShuffle
return (jint) processedBytes;
}
/*
* Class: org_xerial_snappy_BitShuffleNative
* Method: unshuffleDirectBuffer
* Signature: (Ljava/nio/ByteBuffer;IIILjava/nio/ByteBuffer;I)I
*/
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_unshuffleDirectBuffer
(JNIEnv * env, jobject self, jobject input, jint inputOffset, jint typeSize, jint length, jobject output, jint outputOffset)
{
char* inputBuffer = (char*) env->GetDirectBufferAddress(input);
char* outputBuffer = (char*) env->GetDirectBufferAddress(output);
if(inputBuffer == 0 || outputBuffer == 0) {
throw_exception(env, self, 3);
return (jint) 0;
}
int64_t processedBytes = bshuf_bitunshuffle(
inputBuffer + inputOffset, outputBuffer + outputOffset, (size_t) (length / typeSize), (size_t) typeSize, 0);
return (jint) processedBytes;
}

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@ -9,18 +9,34 @@ extern "C" {
#endif
/*
* Class: org_xerial_snappy_BitShuffleNative
* Method: bitShuffle
* Method: shuffle
* Signature: (Ljava/lang/Object;IIILjava/lang/Object;I)I
*/
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_bitShuffle
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_shuffle
(JNIEnv *, jobject, jobject, jint, jint, jint, jobject, jint);
/*
* Class: org_xerial_snappy_BitShuffleNative
* Method: bitUnShuffle
* Method: shuffleDirectBuffer
* Signature: (Ljava/nio/ByteBuffer;IIILjava/nio/ByteBuffer;I)I
*/
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_shuffleDirectBuffer
(JNIEnv *, jobject, jobject, jint, jint, jint, jobject, jint);
/*
* Class: org_xerial_snappy_BitShuffleNative
* Method: unshuffle
* Signature: (Ljava/lang/Object;IIILjava/lang/Object;I)I
*/
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_bitUnShuffle
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_unshuffle
(JNIEnv *, jobject, jobject, jint, jint, jint, jobject, jint);
/*
* Class: org_xerial_snappy_BitShuffleNative
* Method: unshuffleDirectBuffer
* Signature: (Ljava/nio/ByteBuffer;IIILjava/nio/ByteBuffer;I)I
*/
JNIEXPORT jint JNICALL Java_org_xerial_snappy_BitShuffleNative_unshuffleDirectBuffer
(JNIEnv *, jobject, jobject, jint, jint, jint, jobject, jint);
#ifdef __cplusplus

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@ -25,6 +25,7 @@
package org.xerial.snappy;
import java.io.IOException;
import java.nio.ByteBuffer;
/**
* JNI interfaces of the {@link BitShuffle} implementation. The native method in this class is
@ -45,9 +46,15 @@ public class BitShuffleNative
// A quick benchmark result can be found in a gist below;
// https://gist.github.com/maropu/01103215df34b317a7a7
// ------------------------------------------------------------------------
public native int bitShuffle(Object input, int inputOffset, int typeSize, int byteLength, Object output, int outputOffset)
public native int shuffle(Object input, int inputOffset, int typeSize, int byteLength, Object output, int outputOffset)
throws IOException;
public native int bitUnShuffle(Object input, int inputOffset, int typeSize, int byteLength, Object output, int outputOffset)
public native int shuffleDirectBuffer(ByteBuffer input, int inputOffset, int typeSize, int byteLength, ByteBuffer output, int outputOffset)
throws IOException;
public native int unshuffle(Object input, int inputOffset, int typeSize, int byteLength, Object output, int outputOffset)
throws IOException;
public native int unshuffleDirectBuffer(ByteBuffer input, int inputOffset, int typeSize, int byteLength, ByteBuffer output, int outputOffset)
throws IOException;
}

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@ -0,0 +1,53 @@
/*--------------------------------------------------------------------------
* Copyright 2011 Taro L. Saito
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*--------------------------------------------------------------------------*/
//--------------------------------------
// XerialJ
//
// SnappyErrorCode.java
// Since: 2011/03/30 14:56:50
//
// $URL$
// $Author$
//--------------------------------------
package org.xerial.snappy;
/**
* Type codes used in ByteBuffer based BitShuffle APIs
*
* @author leo
*/
public enum BitShuffleType
{
BYTE(1),
SHORT(2),
INT(4),
LONG(8),
FLOAT(4),
DOUBLE(8);
public final int id;
private BitShuffleType(int id)
{
this.id = id;
}
public int getTypeSize()
{
return id;
}
}

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@ -26,57 +26,295 @@ package org.xerial.snappy;
import static org.junit.Assert.*;
import java.nio.ByteBuffer;
import org.junit.Assert;
import org.junit.Test;
public class BitShuffleTest {
@Test
public void bitShuffleLongArray()
public void directBufferCheck()
throws Exception
{
ByteBuffer heapBuf = ByteBuffer.allocate(64);
ByteBuffer directBuf = ByteBuffer.allocateDirect(64);
// Tests for BitShuffle.shuffle()
try {
BitShuffle.shuffle(heapBuf, BitShuffleType.BYTE, directBuf);
fail("no expected exception happened");
}
catch (SnappyError e) {
Assert.assertTrue(e.errorCode == SnappyErrorCode.NOT_A_DIRECT_BUFFER);
Assert.assertTrue(e.getMessage().contains("input is not a direct buffer"));
}
try {
BitShuffle.shuffle(directBuf, BitShuffleType.BYTE, heapBuf);
fail("no expected exception happened");
}
catch (SnappyError e) {
Assert.assertTrue(e.errorCode == SnappyErrorCode.NOT_A_DIRECT_BUFFER);
Assert.assertTrue(e.getMessage().contains("destination is not a direct buffer"));
}
// Then, tests for BitShuffle.unshuffle()
try {
BitShuffle.unshuffle(heapBuf, BitShuffleType.BYTE, directBuf);
fail("no expected exception happened");
}
catch (SnappyError e) {
Assert.assertTrue(e.errorCode == SnappyErrorCode.NOT_A_DIRECT_BUFFER);
Assert.assertTrue(e.getMessage().contains("input is not a direct buffer"));
}
try {
BitShuffle.unshuffle(directBuf, BitShuffleType.BYTE, heapBuf);
fail("no expected exception happened");
}
catch (SnappyError e) {
Assert.assertTrue(e.errorCode == SnappyErrorCode.NOT_A_DIRECT_BUFFER);
Assert.assertTrue(e.getMessage().contains("destination is not a direct buffer"));
}
}
@Test
public void inputBufferSizeCheck()
throws Exception
{
ByteBuffer inputBuf = ByteBuffer.allocateDirect(9);
ByteBuffer outputBuf = ByteBuffer.allocateDirect(8);
try {
BitShuffle.shuffle(inputBuf, BitShuffleType.INT, outputBuf);
fail("no expected exception happened");
} catch (IllegalArgumentException e) {
Assert.assertTrue(e.getMessage().startsWith("input length must be a multiple of the given type size"));
}
try {
BitShuffle.unshuffle(inputBuf, BitShuffleType.INT, outputBuf);
fail("no expected exception happened");
} catch (IllegalArgumentException e) {
Assert.assertTrue(e.getMessage().startsWith("length of input shuffled data must be a multiple of the given type size"));
}
}
@Test
public void outputBufferSizeCheck()
throws Exception {
ByteBuffer inputBuf = ByteBuffer.allocateDirect(12);
ByteBuffer outputBuf = ByteBuffer.allocateDirect(3);
try {
BitShuffle.shuffle(inputBuf, BitShuffleType.INT, outputBuf);
fail("no expected exception happened");
} catch (IllegalArgumentException e) {
Assert.assertTrue(e.getMessage().equals("not enough space for output"));
}
try {
BitShuffle.unshuffle(inputBuf, BitShuffleType.INT, outputBuf);
fail("no expected exception happened");
} catch (IllegalArgumentException e) {
Assert.assertTrue(e.getMessage().equals("not enough space for output"));
}
}
@Test
public void shuffleDirectLongArray()
throws Exception
{
ByteBuffer testData = ByteBuffer.allocateDirect(48);
ByteBuffer shuffled = ByteBuffer.allocateDirect(48);
testData.putLong(2);
testData.putLong(3);
testData.putLong(15);
testData.putLong(4234);
testData.putLong(43251531412342342L);
testData.putLong(23423422342L);
testData.flip();
BitShuffle.shuffle(testData, BitShuffleType.LONG, shuffled);
ByteBuffer result = ByteBuffer.allocateDirect(48);
BitShuffle.unshuffle(shuffled, BitShuffleType.LONG, result);
assertEquals(2L, result.getLong());
assertEquals(3L, result.getLong());
assertEquals(15L, result.getLong());
assertEquals(4234L, result.getLong());
assertEquals(43251531412342342L, result.getLong());
assertEquals(23423422342L, result.getLong());
}
@Test
public void shuffleDirectShortArray()
throws Exception
{
ByteBuffer testData = ByteBuffer.allocateDirect(18);
ByteBuffer shuffled = ByteBuffer.allocateDirect(18);
testData.putShort((short) 432);
testData.putShort((short) -32267);
testData.putShort((short) 1);
testData.putShort((short) 3);
testData.putShort((short) 34);
testData.putShort((short) 43);
testData.putShort((short) 34);
testData.putShort(Short.MAX_VALUE);
testData.putShort((short) -1);
testData.flip();
BitShuffle.shuffle(testData, BitShuffleType.SHORT, shuffled);
ByteBuffer result = ByteBuffer.allocateDirect(18);
BitShuffle.unshuffle(shuffled, BitShuffleType.SHORT, result);
assertEquals(432, result.getShort());
assertEquals(-32267, result.getShort());
assertEquals(1, result.getShort());
assertEquals(3, result.getShort());
assertEquals(34, result.getShort());
assertEquals(43, result.getShort());
assertEquals(34, result.getShort());
assertEquals(Short.MAX_VALUE, result.getShort());
assertEquals(-1, result.getShort());
}
@Test
public void shuffleDirectIntArray()
throws Exception
{
ByteBuffer testData = ByteBuffer.allocateDirect(48);
ByteBuffer shuffled = ByteBuffer.allocateDirect(48);
testData.putInt(432);
testData.putInt(-32267);
testData.putInt(1);
testData.putInt(3);
testData.putInt(34);
testData.putInt(43);
testData.putInt(34);
testData.putInt(Short.MAX_VALUE);
testData.putInt(-1);
testData.putInt(Integer.MAX_VALUE);
testData.putInt(3424);
testData.putInt(43);
testData.flip();
BitShuffle.shuffle(testData, BitShuffleType.INT, shuffled);
ByteBuffer result = ByteBuffer.allocateDirect(48);
BitShuffle.unshuffle(shuffled, BitShuffleType.INT, result);
assertEquals(432, result.getInt());
assertEquals(-32267, result.getInt());
assertEquals(1, result.getInt());
assertEquals(3, result.getInt());
assertEquals(34, result.getInt());
assertEquals(43, result.getInt());
assertEquals(34, result.getInt());
assertEquals(Short.MAX_VALUE, result.getInt());
assertEquals(-1, result.getInt());
assertEquals(Integer.MAX_VALUE, result.getInt());
assertEquals(3424, result.getInt());
assertEquals(43, result.getInt());
}
@Test
public void shuffleDirectFloatArray()
throws Exception
{
ByteBuffer testData = ByteBuffer.allocateDirect(36);
ByteBuffer shuffled = ByteBuffer.allocateDirect(36);
testData.putFloat(100.0f);
testData.putFloat(0.5f);
testData.putFloat(-0.1f);
testData.putFloat(30.3f);
testData.putFloat(Float.MIN_NORMAL);
testData.putFloat(Float.MAX_EXPONENT);
testData.putFloat(Float.MAX_VALUE);
testData.putFloat(-0.1f);
testData.putFloat(Integer.MIN_VALUE);
testData.flip();
BitShuffle.shuffle(testData, BitShuffleType.FLOAT, shuffled);
ByteBuffer result = ByteBuffer.allocateDirect(36);
BitShuffle.unshuffle(shuffled, BitShuffleType.FLOAT, result);
assertEquals(100.0f, result.getFloat(), 0.0000001f);
assertEquals(0.5f, result.getFloat(), 0.0000001f);
assertEquals(-0.1f, result.getFloat(), 0.0000001f);
assertEquals(30.3f, result.getFloat(), 0.0000001f);
assertEquals(Float.MIN_NORMAL, result.getFloat(), 0.0000001f);
assertEquals(Float.MAX_EXPONENT, result.getFloat(), 0.0000001f);
assertEquals(Float.MAX_VALUE, result.getFloat(), 0.0000001f);
assertEquals(-0.1f, result.getFloat(), 0.0000001f);
assertEquals(Integer.MIN_VALUE, result.getFloat(), 0.0000001f);
}
@Test
public void shuffleDirectDoubleArray()
throws Exception
{
ByteBuffer testData = ByteBuffer.allocateDirect(72);
ByteBuffer shuffled = ByteBuffer.allocateDirect(72);
testData.putDouble(100.0);
testData.putDouble(0.5);
testData.putDouble(-0.1);
testData.putDouble(30.3);
testData.putDouble(Double.MIN_NORMAL);
testData.putDouble(Double.MAX_EXPONENT);
testData.putDouble(Double.MAX_VALUE);
testData.putDouble(-0.1);
testData.putDouble(Integer.MIN_VALUE);
testData.flip();
BitShuffle.shuffle(testData, BitShuffleType.DOUBLE, shuffled);
ByteBuffer result = ByteBuffer.allocateDirect(72);
BitShuffle.unshuffle(shuffled, BitShuffleType.DOUBLE, result);
assertEquals(100.0, result.getDouble(), 0.0000001);
assertEquals(0.5, result.getDouble(), 0.0000001);
assertEquals(-0.1, result.getDouble(), 0.0000001);
assertEquals(30.3, result.getDouble(), 0.0000001);
assertEquals(Double.MIN_NORMAL, result.getDouble(), 0.0000001);
assertEquals(Double.MAX_EXPONENT, result.getDouble(), 0.0000001);
assertEquals(Double.MAX_VALUE, result.getDouble(), 0.0000001);
assertEquals(-0.1, result.getDouble(), 0.0000001);
assertEquals(Integer.MIN_VALUE, result.getDouble(), 0.0000001);
}
@Test
public void shuffleLongArray()
throws Exception
{
long[] data = new long[] {2, 3, 15, 4234, 43251531412342342L, 23423422342L};
byte[] shuffledData = BitShuffle.bitShuffle(data);
long[] result = BitShuffle.bitUnShuffleLongArray(shuffledData);
byte[] shuffledData = BitShuffle.shuffle(data);
long[] result = BitShuffle.unshuffleLongArray(shuffledData);
assertArrayEquals(data, result);
}
@Test
public void bitShuffleShortArray()
public void shuffleShortArray()
throws Exception
{
short[] data = new short[] {432, -32267, 1, 3, 34, 43, 34, Short.MAX_VALUE, -1};
byte[] shuffledData = BitShuffle.bitShuffle(data);
short[] result = BitShuffle.bitUnShuffleShortArray(shuffledData);
byte[] shuffledData = BitShuffle.shuffle(data);
short[] result = BitShuffle.unshuffleShortArray(shuffledData);
assertArrayEquals(data, result);
}
@Test
public void bitShuffleIntArray()
public void shuffleIntArray()
throws Exception
{
int[] data = new int[] {432, -32267, 1, 3, 34, 43, 34, Short.MAX_VALUE, -1, Integer.MAX_VALUE, 3424, 43};
byte[] shuffledData = BitShuffle.bitShuffle(data);
int[] result = BitShuffle.bitUnShuffleIntArray(shuffledData);
byte[] shuffledData = BitShuffle.shuffle(data);
int[] result = BitShuffle.unshuffleIntArray(shuffledData);
assertArrayEquals(data, result);
}
@Test
public void bitShuffleFloatArray()
public void shuffleFloatArray()
throws Exception
{
float[] data = new float[] {100.0f, 0.5f, -0.1f, 30.3f, Float.MIN_NORMAL, Float.MAX_EXPONENT, Float.MAX_VALUE, -0.1f, Integer.MIN_VALUE};
byte[] shuffledData = BitShuffle.bitShuffle(data);
float[] result = BitShuffle.bitUnShuffleFloatArray(shuffledData);
byte[] shuffledData = BitShuffle.shuffle(data);
float[] result = BitShuffle.unshuffleFloatArray(shuffledData);
assertArrayEquals(data, result, 0.0000001f);
}
@Test
public void bitShuffleDoubleArray()
public void shuffleDoubleArray()
throws Exception
{
double[] data = new double[] {100.0f, 0.5f, -0.1f, 30.3f, Float.MIN_NORMAL, Float.MAX_EXPONENT, Float.MAX_VALUE, -0.1f, Integer.MIN_VALUE};
byte[] shuffledData = BitShuffle.bitShuffle(data);
double[] result = BitShuffle.bitUnShuffleDoubleArray(shuffledData);
byte[] shuffledData = BitShuffle.shuffle(data);
double[] result = BitShuffle.unshuffleDoubleArray(shuffledData);
assertArrayEquals(data, result, 0.0000001f);
}
}